My Curriculum Vitae:



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(* First Co-Authors, # Last Co-Authors, $ Corresponding Author)

H index = 13 (source: ISI Web Of Science, 2014)
H index = 22 (source: Google Scholar, 2016)


vincent navratil's citations

35 Publications [P] in peer-reviewed journals
    [2019] [2018] [2017] [2016] [2015] [2014] [2013] [2012] [2011] [2010]
    [2009] [2008] [2007] [2006] [2005] [2004] [2003] [2002] [2001] [2000]


    See all the publications in pubmed.

    [2019] [top]
  • [P35] Database and Bioinformatic Analysis of BCL-2 Family Proteins and BH3-Only Proteins.
    Aouacheria A, Navratil V., Combet C.
    Methods Mol Biol. 2019;1877:23-43. doi: 10.1007/978-1-4939-8861-7_2
    [IF=1.29]

    • [2018] [top]
  • [P34] Advances in Analyzing Virus-Induced Alterations of Host Cell Splicing.
    Ashraf U., Benoit-Pilven C.,Lacroix V., Navratil V., Naffakh N.
    Trends in Microbiology     doi: 10.1016/j.tim.2018.11.004
    [IF=11.77]

    • [2017] [top]
  • [P33] Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota: interactions between microorganisms in raw meat.
    Galia W, Leriche F, Cruveiller S, Garnier C, Navratil V., Dubost A, Blanquet-Diot S, Thevenot-Sergentet D.
    BMC genomics. 2017 Aug.
    [IF=4.42]
  • [P32] In the hunt for genomic markers of metabolic resistance to pyrethroids in the mosquito Aedes aegypti: An integrated next-generation sequencing approach.
    Faucon F, Gaude T, Dusfour I, Navratil V., Corbel V, Juntarajumnong W, Girod R, Poupardin R, Boyer F, Reynaud S, David JP.
    PLoS Negl Trop Dis. 2017 Apr.
    [IF=3.37]

    • [2016] [top]
  • [P31] Topological analysis of metabolic networks integrating co-segregating transcriptomes and metabolomes in type 2 diabetic rat congenic series.
    Dumas ME., Domange C., Calderari S., Martínez AR., Ayala R., Wilder SP., Suárez-Zamorano N., Collins SC., Wallis RH., Gu Q., Wang Y., Hue C., Otto GW, Argoud K., Navratil V., Mitchell SC., Lindon JC., Holmes E., Cazier JB., Nicholson JK., Gauguier D.
    Genome Medicine 2016 Sept.
    [IF=5.85]
  • [P30] Splicing misregulation of SCN5A contributes to cardiac-conduction delay and heart arrhythmia in myotonic dystrophy.
    Freyermuth F., Rau F., Kokunai Y., Linke T., Sellier C., Nakamori M., Kino Y, Arandel L., Jollet A., Thibault C., Philipps M., Vicaire S., Jost B., Udd B., Day J. W., Duboc D., Wahbi K., Matsumura T., Fujimura H., Mochizuki H., Deryckere F., Kimura T., Nukina N., Ishiura S., Lacroix V., Campan-Fournier A., Navratil V., Chautard E., Auboeuf D., Horie M., Imoto K., Lee K.Y, S. Swanson M., Lopez de Munain A., Inada S., Itoh H., Nakazawa K., Ashihara T., Wang E., Zimmer T., Furling D., Takahashi M.T. & Charlet-Berguerand N.
    Nature Communication 2016 April.
    [IF=11.470]
  • [P29] Nuclear functions of nucleolin through global proteomics and interactomic approaches.
    Salvetti A, Couté Y, Epstein A, Arata L, Kraut A, Navratil V., Bouvet P, Greco A
    J. Proteome Res. 2016 April.
    [IF=5.056]

    • [2015] [top]
  • [P28] Unravelling genomic changes associated with insecticide resistance in the dengue mosquito Aedes aegypti by deep targeted sequencing.
    F. Faucon, I. Dusfour, T. Gaude, Navratil V., F. Boyer, F. Chandre, Patcharawan Sirisopa, K. Thanispong, W. Juntarajumnong, R. Poupardin, T. Chareonviriyaphap, R. Girod, V. Corbel, S. Reynaud, JP. David.
    Genome Research 2015 Jul.
    [IF=13.85]
  • [P27] Sample size calculation in metabolic phenotyping studies.
    E. Biloir, Navratil V., B.J. Blaise.
    Briefing in bioinformatics 2015 January. pii: bbu052.
    [IF=5.919]
  • [P26] VirHostNet 2.0: surfing on the web of virus/host molecular interactions data.
    Guirimand T., Delmotte S. and Navratil V.$
    Nucleic Acids Res. 2015 Jan 28;43(Database issue):D583-7.
    [IF=8.808]

    • [2014] [top]
  • [P25] Chemical and biological insecticides select distinct gene expression patterns in Aedes aegypti mosquito.
    Després L.$, Stalinski R., Faucon F., Navratil V., Viari A., Paris M., Tetreau G., Poupardin R., Asam Riaz M., Bonin A., Reynaud S. and David JP.
    Biology Letters 2014 Dec. 10(12). pii: 20140716. doi: 10.1098/rsbl.2014.0716.
    [IF=3.348]
  • [P24] Gene expression patterns and sequence polymorphisms associated with mosquito resistance to Bacillus thuringiensis israelensis toxins.
    Després L., Stalinski R., Tetreau G., Paris M., Bonin A., Navratil V. and Reynaud S and David JP.
    BMC genomics. 2014 Oct 23;15(1):926.
    [IF=4.42]
  • [P23] Comparative analysis of response to selection with three insecticides in the dengue mosquito Aedes aegypti using mRNA sequencing.
    David, J.P., Faucon, F., Chandor-Proust, A., Poupardin, R., Asam Riaz, M., Bonin, A., Navratil V. and Reynaud, S.
    BMC genomics. 2014 Mar 5;15(1):174.
    [IF=4.42] Article Highly Accessed.

    • [2013] [top]
  • [P22] Structure homology and interaction redundancy for discovering virus–host protein interactions.
    de Chassey B., Meyniel-Schicklin L., Aublin-Gex A., Navratil V., Chantier T., André P. & Lotteau V.$
    EMBO report. 2013 Oct;14(10):938-44.
    [IF=7.189]
  • [P21] SRV: an opensource toolbox to accelerate the recovery of metabolic biomarkers and correlations from metabolic phenotyping data sets.
    Navratil V.$, Pontoizeau C., Billoir E. and Blaise B.J.$
    Bioinformatics. 2013 May 15;29(10):1348-9.
    [IF=5.323]
    [2012] [top]
  • [P20] Host-pathogen interactome mapping for HTLV-1 and 2 retroviruses.
    Simonis N., Rual J.F., Lemmens I., Boxus M., Hirozane-Kishikawa T., Gatot J.S., Dricot A., Hao T., Vertommen D., Legros S., Daakour S., Klitgord N., Martin M., Willaert J.F., Dequiedt F., Navratil V., Cusick M.E., Burny A., Van Lint C., E Hill D., Tavernier J., Kettmann R., Vidal M. and Twizere J.C.
    Retrovirology. 2012 Mar 29;9:26.
    [IF=5.66] Article Highly Accessed.
  • [P19] Metabolomics-on-a-Chip and Predictive Systems Toxicology in Microfluidic Bioartificial Organs.
    Shintu L., Baudoin R., Navratil V., Prot J.M., Pontoizeau C., Defernez M., Blaise B.J., Domange C., Péry A.R.R., Toulhoat P., Legallais C., Brochot C., Leclerc E.#$, and Dumas M.E.#$
    Anal. Chem. 2012 Feb 21;84(4):1840-8.
    [IF=5.695]

    • [2011] [top]
  • [P18] IRGM Is a Common Target of RNA Viruses that Subvert the Autophagy Network.
    Pombo Grégoire I., Richetta C., Meyniel-Schicklin L., Borel S., Pradezynski F., Diaz O., Deloire A., Azocar O., Baguet J., Le Breton L., Mangeot P.E., Navratil V., Joubert P.E., Flacher M., Vidalain P.O., André P., Lotteau V., Biard-Piechaczyk M., Rabourdin-Combe C.#, Faure M.$#
    Plos Pathogens 2011 Dec;7(12).
    [IF=9.13]
  • [P17] A Metabolomic and Systems Biology Perspective on the Brain of the Fragile X Syndrome Mouse Model.
    Davidovic L.$, Navratil V., Bonaccorso C.M., Catania M.V., Bardoni B., Dumas M.E.$
    Genome Research 2011 Dec 21(12):2190-202.
    [IF=13.608]
  • [P16] Orthogonal Filtered Recoupled-STOCSY to Extract Metabolic Networks Associated to Minor Perturbations from NMR Spectroscopy.
    Blaise B., Navratil V., Emsley L., Toulhoat P.$
    J. Proteome Res. 2011 Sep 2;10(9):4342-8.
    [IF=5.056]
  • [P15] Broad-Ranging Natural Metabotype Variation Drives Physiological Plasticity in Healthy Control Inbred Rat Strains.
    Pontoizeau C., Fearnside J., Navratil V., Domange C., Cazier J.B., Fernandez C., Kaisaki P.J., Emsley L., Toulhoat P., Bihoreau M.T., Nicholson J.K., Gauguier D., Dumas ME.$
    J. Proteome Res. 2011 Apr 1;10(4):1675-89.
    [IF=5.056]
  • [P14] When the human viral infectome and diseasome networks collide: towards a systems biology platform for the aetiology of human diseases.
    Navratil V.$, de Chassey B., Rabourdin-Combe C., Lotteau V.
    BMC Systems Biology 2011 Jan 21;5(1):13.
    [IF=2.98] Article Highly Accessed + Most Viewed Article.

    • [2010] [top]
  • [P13] Two-Dimensional Statistical Recoupling for the Identification of Perturbed Metabolic Networks from NMR Spectroscopy.
    Blaise B., Navratil V., Domange C., Shintu L., Dumas M.E., Elena B., Emsley L., Toulhoat P.$
    J. Proteome Res. 2010 Sep 3;9(9):4513–20.
    [IF=5.056]
  • [P12] Systems-level comparison of protein-protein interactions between viruses and the human type I interferon system network.
    Navratil V.*$, de Chassey B.*, Meyniel L., Pradezynski F., Andre P., Rabourdin-Combe C., Lotteau V.$
    J. Proteome Res. 2010 Jul 2;9(7):3527-36.
    [IF=5.056] Ten Most-Accessed Article.
  • [P11] ViralORFeome: an integrated database to generate a versatile collection of viral ORFs.
    Pellet J., Tafforeau L., Lucas-Hourani M., Navratil V., Meyniel L., Achaz G., Guironnet-Paquet A., Aublin-Gex A., Caignard G., Cassonet P., Chaboud A., Chantier T., Deloire A., Demeret C., Le Breton M., Neveu G., Jacotot L., Vaglio P., Delmotte S., Gautier C., Combet C., Deleage G., Favre M., Tangy F., Jacob Y., Andre P., Lotteau V., Rabourdin-Combe C., Vidalain PO.
    Nucleic Acids Res. 2010 Jan;38(Database issue):D371-8. Epub 2009 Dec 8.
    [IF=8.808]

    • [2009] [top]
  • [P10] pISTil: a pipeline for yeast two-hybrid Interaction Sequence Tags identification and analysis.
    Pellet J., Meyniel L., de Chassey B., Tafforeau L., Vidalain P.O., Lotteau V. Rabourdin-Combe C.#, Navratil V.#$
    BMC Res. Notes 2009 Oct 29;2:220.
    [U-IF=1.39]
  • [P9] VirHostNet: a knowledge base for the management and analysis of genome wide virus-host interactome.
    Navratil V.$, de Chassey B., Meyniel L., Delmotte S., Gautier C., Andr P., Lotteau V., Rabourdin-Combe C.
    Nucleic Acids Res. 2009 Jan;37(Database issue).
    [IF=8.808]

    • [2008] [top]
  • [P8] The HCV infection protein network.
    Navratil V.*, de Chassey B.*, Tafforeau L.*, Aguaugue S, Hiet M.S., Faria B.F., Chantier T., Pradezinsky F., Pellet J., Le Breton M., Aublin A., Davoust N., Mangeot P., The Infectious mapping project I-MaP, Vidalain P.O., Vidal M., Andr P., Rabourdin-Combe C., Lotteau V.$
    Mol. Syst. Biol. 2008;4:230.
    [IF=11.340]
  • [P7] DigiPINS : a database for vertebrate exonic SNPs an its application to cancer association studies.
    Navratil V., Penel S., Delmotte S., Mouchiroud D., Gautier C., Aouacheria A.$
    Biochimie 2008 Apr;90(4):563-9.
    [IF=3.555]

    • [2007] [top]
  • [P6] Genetic and haplotypic structure in 14 European and African cattle breeds.
    Gautier M, Faraut T, Moazami-Goudarzi K, Navratil V., Foglio M, Grohs C, Boland A, Garnier JG, Boichard D, Lathrop M, Gut I, Eggen A.
    Genetics 2007 Oct;177(2):1059-70.
    [IF=4.311]
  • [P5] In silico whole-genome screening for cancer-related single-nucleotide polymorphisms located in human mRNA untranslated regions.
    Navratil V.*, Aouacheria A.*$, Lopez-Perez R., C Gutierrez N. , Churkin A., Barash D., Mouchiroud D. and Gautier C.
    BMC Genomics 2007 Jan 3;8:2.
    [IF=4.42]

    • [2006] [top]
  • [P4] Insights into early extracellular matrix evolution: sequence and structure similarities between sponging and basement membrane type IV collagen NC1 domains point to common ancestry.
    Aouacheria A., Geourjon C., Aghajari N., Navratil V., Deleage G., Lethias C., Exposito JY.
    Mol. Biol. Evol. 2006 Dec;23(12):2288-302.
    [IF=10.353]
  • [P3] Bioinformatic screening of human ESTs for differentially expressed genes in normal and tumor tissues.
    Navratil V.*, Aouacheria A.*$, Mouchiroud D., Gautier C.
    BMC Genomics 2006 Apr 26;7:94.

    [IF=4.42] Article Highly Accessed.

    • [2005] [top]
  • [P2] Homology-dependent methylation in primate repetitive DNA.
    Meunier J., Khelifi A., Navratil V., Duret L.$
    Proc. Natl. Acad. Sci. U S A. 2005 Apr 12;102(15):5471-6.
    [IF=9.737] Article selected by the "Faculty of 1000".
  • [P1] In silico whole-genome scanning of cancer-associated nonsynonymous SNPs and molecular characterization of a dynein light chain tumour variant.
    Navratil V.*, Aouacheria A.*$, Wen W., Jiang M., Mouchiroud D., Gautier C., Gouy M., Zhang M.
    Oncogene 2005 Sep 8;24(40):6133-42.
    [IF=7.357]
1 Book Chapter [BC]

    [2008] [top]
  • [BC1] Expressed Sequence Tags in cancer genomics.
    Navratil V., Aouacheria A.$
    In "Computational Biology : New Research". Expert commentary
    Nova Science Publishers, Inc. Invited review.
1 Review [R]

    [2010] [top]
  • [R1] The Virtual Infected Cell: a systems biology rational for antiviral drug discovery. (In french: La Cellule Infectee Virtuelle).
    Navratil V.$, Lotteau V., Rabourdin-Combe C.
    Medecine/Sciences (Paris) 2010 Jul-Aug;26(6-7):603-9.
    [IF=0.486]
Reviewing

Bioinformatics, Open Access Bioinformatics, BMC Cancer, Infection Genetics and Evolution, Plos One

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Designed by NAVRATIL Vincent. Last Release July 2010.